If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 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'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ), 'gf_id' => 'HOM05D000569', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000569' ), 'data_identifier' => 'HOM05D000569', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000569', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '972', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p01270' => 'bna', 'A02p02570' => 'bna', 'A02p08370' => 'bna', 'A02p44070' => 'bna', 'A03p12690' => 'bna', 'A03p20310' => 'bna', 'A04p28180' => 'bna', 'A05p08970' => 'bna', 'A06p18020' => 'bna', 'A06p32660' => 'bna', 'A09p09160' => 'bna', 'A10p18020' => 'bna', 'Aa31LG1G12770' => 'aar', 'Aa31LG1G16280' => 'aar', 'Aa31LG3G13460' => 'aar', 'Aa31LG4G18170' => 'aar', 'Aa31LG5G22120' => 'aar', 'Aa31LG6G14660' => 'aar', 'Actinidia01210' => 'ach', 'Actinidia04135' => 'ach', 'Actinidia07174' => 'ach', 'Actinidia10236' => 'ach', 'Actinidia11955' => 'ach', 'Actinidia17324' => 'ach', 'Actinidia19283' => 'ach', 'Actinidia24134' => 'ach', 'Actinidia25285' => 'ach', 'Actinidia28908' => 'ach', 'Actinidia30296' => 'ach', 'Actinidia31327' => 'ach', 'Actinidia36413' => 'ach', 'Actinidia39755' => 'ach', 'Ah.08g211570' => 'amhyb', 'Ah.14g083930' => 'amhyb', 'AL4G33110' => 'aly', 'AL5G29640' => 'aly', 'AL6G34130' => 'aly', 'AL7G12900' => 'aly', 'AL8G33640' => 'aly', 'AL8G43510' => 'aly', 'Aqoxy1G01142' => 'aox', 'Aqoxy2G01744' => 'aox', 'Aqoxy7G01350' => 'aox', 'Aqoxy7G01408' => 'aox', 'Aqoxy7G03135' => 'aox', 'arahy.Tifrunner.gnm1.ann1.2NJL2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4RT3BY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57J6T7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5EJ7X6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.651GAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6J2YJR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8LTD09' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B6Y69S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5SFE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CDLA1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FD2W4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FYS5DJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I42E36' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IT30K9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IUPJ20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5XH0F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JT7MF5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KM2TY4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N6XVXV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PT27R6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q7ET6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T18AYA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YD3Q2J' => 'arhy', 'AT2G36890' => 'ath', 'AT3G49690' => 'ath', 'AT4G37780' => 'ath', 'AT5G23000' => 'ath', 'AT5G57620' => 'ath', 'AT5G65790' => 'ath', 'ATR0580G069' => 'atr', 'ATR0705G026' => 'atr', 'ATR0807G233' => 'atr', 'ATR1126G004' => 'atr', 'Atru.chr13.889' => 'acertr', 'Atru.chr3.1077' => 'acertr', 'Atru.chr3.3540' => 'acertr', 'Atru.chr7.2038' => 'acertr', 'Atru.chr7.727' => 'acertr', 'Atru.chr8.1794' => 'acertr', 'AUR62004043' => 'cqu', 'AUR62007558' => 'cqu', 'AUR62021352' => 'cqu', 'AUR62034976' => 'cqu', 'AUR62039339' => 'cqu', 'AUR62039999' => 'cqu', 'AUR62040017' => 'cqu', 'AUR62040305' => 'cqu', 'AUR62042067' => 'cqu', 'BcaB01g00683' => 'bca', 'BcaB01g03810' => 'bca', 'BcaB02g09322' => 'bca', 'BcaB02g09897' => 'bca', 'BcaB04g20028' => 'bca', 'BcaB05g22356' => 'bca', 'BcaB05g22671' => 'bca', 'BcaB05g23139' => 'bca', 'BcaB08g36382' => 'bca', 'BcaB08g36383' => 'bca', 'BcaB08g36384' => 'bca', 'BcaC01g02834' => 'bca', 'BcaC01g05636' => 'bca', 'BcaC01g06479' => 'bca', 'BcaC02g07572' => 'bca', 'BcaC02g11813' => 'bca', 'BcaC03g13935' => 'bca', 'BcaC03g14140' => 'bca', 'BcaC03g18354' => 'bca', 'BcaC03g18369' => 'bca', 'BcaC04g19746' => 'bca', 'BcaC04g23247' => 'bca', 'BcaC07g39431' => 'bca', 'BcaNung07389' => 'bca', 'BNapus_Darmor_BZH_scaffold_38p00200' => 'bna', 'BolC1t00140H' => 'bol', 'BolC2t07219H' => 'bol', 'BolC2t07529H' => 'bol', 'BolC2t12496H' => 'bol', 'BolC3t13932H' => 'bol', 'BolC3t14774H' => 'bol', 'BolC3t18253H' => 'bol', 'BolC4t22756H' => 'bol', 'BolC4t28045H' => 'bol', 'BolC8t50084H' => 'bol', 'BolC9t53965H' => 'bol', 'BolC9t57802H' => 'bol', 'BolC9t58234H' => 'bol', 'BraA01t00124Z' => 'bra', 'BraA01t00141Z' => 'bra', 'BraA02t05703Z' => 'bra', 'BraA02t05906Z' => 'bra', 'BraA02t09330Z' => 'bra', 'BraA03t10582Z' => 'bra', 'BraA03t11277Z' => 'bra', 'BraA04t18304Z' => 'bra', 'BraA05t19859Z' => 'bra', 'BraA06t24892Z' => 'bra', 'BraA06t26194Z' => 'bra', 'BraA09t36568Z' => 'bra', 'BraA10t43877Z' => 'bra', 'C01p01430' => 'bna', 'C02p11430' => 'bna', 'C02p14090' => 'bna', 'C02p64320' => 'bna', 'C03p14890' => 'bna', 'C03p23850' => 'bna', 'C03p59880' => 'bna', 'C04p11080' => 'bna', 'C04p65560' => 'bna', 'C08p24700' => 'bna', 'C09p10690' => 'bna', 'C09p49480' => 'bna', 'C09p53580' => 'bna', 'CAN.G1241.5' => 'can', 'CAN.G1343.16' => 'can', 'CAN.G1755.9' => 'can', 'CAN.G416.34' => 'can', 'CAN.G546.15' => 'can', 'CAN.G584.17' => 'can', 'CAN.G900.27' => 'can', 'CANSAT01G0999' => 'cansat', 'CANSAT25G3639' => 'cansat', 'CANSAT54G1954' => 'cansat', 'CANSAT56G2180' => 'cansat', 'CANSAT56G4032' => 'cansat', 'CANSAT80G2794' => 'cansat', 'CARHR131350' => 'chi', 'CARHR158760' => 'chi', 'CARHR190530' => 'chi', 'CARHR246170' => 'chi', 'CARHR271380' => 'chi', 'CARHR279790' => 'chi', 'Carub.0004s1874' => 'cru', 'Carub.0005s1604' => 'cru', 'Carub.0006s2077' => 'cru', 'Carub.0007s0247' => 'cru', 'Carub.0008s1812' => 'cru', 'Carub.0008s2668' => 'cru', 'Ca_08907_v3' => 'car', 'Ca_16629_v3' => 'car', 'Ca_21204_v3' => 'car', 'Ca_22090_v3' => 'car', 'Ca_24667_v3' => 'car', 'Cc01_g10490' => 'ccan', 'Cc06_g04300' => 'ccan', 'Cc06_g10860' => 'ccan', 'Cc06_g13520' => 'ccan', 'Cc07_g07500' => 'ccan', 'Cc08_g10080' => 'ccan', 'Cc10_g07810' => 'ccan', 'CDE02G0649' => 'cde', 'CDE02G1955' => 'cde', 'CDE04G0449' => 'cde', 'CDE04G0527' => 'cde', 'CDE04G0682' => 'cde', 'CDE04G0850' => 'cde', 'CDE05G3087' => 'cde', 'CDE05G3549' => 'cde', 'CDE06G0119' => 'cde', 'CDE06G1681' => 'cde', 'CDE07G1584' => 'cde', 'CDE09G1313' => 'cde', 'CDE10G0311' => 'cde', 'CDE10G1030' => 'cde', 'Cfa006785' => 'cfa', 'Cfa010306' => 'cfa', 'Cfa013721' => 'cfa', 'Cfa017625' => 'cfa', 'Cfa017918' => 'cfa', 'Ciclev10009336m.g' => 'ccl', 'Ciclev10010364m.g' => 'ccl', 'Ciclev10010621m.g' => 'ccl', 'Ciclev10012151m.g' => 'ccl', 'Ciclev10027178m.g' => 'ccl', 'Ciclev10028804m.g' => 'ccl', 'CiPaw.03G220600' => 'cil', 'CiPaw.04G153900' => 'cil', 'CiPaw.07G038200' => 'cil', 'CiPaw.07G170500' => 'cil', 'CiPaw.07G189700' => 'cil', 'CiPaw.08G037400' => 'cil', 'CiPaw.08G053500' => 'cil', 'CiPaw.08G149200' => 'cil', 'CiPaw.09G171700' => 'cil', 'CiPaw.10G129200' => 'cil', 'CiPaw.13G119700' => 'cil', 'CiPaw.14G088100' => 'cil', 'CiPaw.15G043000' => 'cil', 'CiPaw.16G030900' => 'cil', 'ClCG01G017880' => 'cla', 'ClCG02G021460' => 'cla', 'ClCG03G002780' => 'cla', 'ClCG03G015900' => 'cla', 'ClCG05G017640' => 'cla', 'ClCG06G013160' => 'cla', 'ClCG08G016790' => 'cla', 'ClCG08G016830' => 'cla', 'ClCG10G020060' => 'cla', 'ClCG11G012500' => 'cla', 'COL.COLO4_11062' => 'col', 'COL.COLO4_11632' => 'col', 'COL.COLO4_21015' => 'col', 'COL.COLO4_38416' => 'col', 'Cpa.g.sc102.29' => 'cpa', 'Cpa.g.sc129.59' => 'cpa', 'Cpa.g.sc160.24' => 'cpa', 'Cpa.g.sc65.37' => 'cpa', 'Cpa.g.sc95.69' => 'cpa', 'CsaV3_1G013560' => 'csa', 'CsaV3_1G031310' => 'csa', 'CsaV3_1G040050' => 'csa', 'CsaV3_2G008030' => 'csa', 'CsaV3_2G025790' => 'csa', 'CsaV3_2G025830' => 'csa', 'CsaV3_3G036040' => 'csa', 'CsaV3_4G035370' => 'csa', 'CsaV3_6G014240' => 'csa', 'CsaV3_6G044410' => 'csa', 'CsaV3_UNG046320' => 'csa', 'CSS0003347' => 'camsi', 'CSS0004163' => 'camsi', 'CSS0006222' => 'camsi', 'CSS0006542' => 'camsi', 'CSS0007776' => 'camsi', 'CSS0008766' => 'camsi', 'CSS0008895' => 'camsi', 'CSS0014581' => 'camsi', 'CSS0016752' => 'camsi', 'CSS0021810' => 'camsi', 'CSS0025091' => 'camsi', 'CSS0027397' => 'camsi', 'CSS0029077' => 'camsi', 'CSS0034271' => 'camsi', 'CSS0040740' => 'camsi', 'CSS0042596' => 'camsi', 'CSS0044812' => 'camsi', 'CSS0049603' => 'camsi', 'DCAR_000774' => 'dca', 'DCAR_006110' => 'dca', 'DCAR_009305' => 'dca', 'DCAR_009538' => 'dca', 'DCAR_010791' => 'dca', 'DCAR_012015' => 'dca', 'DCAR_014707' => 'dca', 'DCAR_015002' => 'dca', 'DCAR_017673' => 'dca', 'DCAR_017965' => 'dca', 'DCAR_025829' => 'dca', 'Dinv23060' => 'din', 'Dinv23412' => 'din', 'Dinv26968' => 'din', 'Dinv27952' => 'din', 'Dinv29362' => 'din', 'Dinv34727' => 'din', 'Dinv34728' => 'din', 'Dinv35790' => 'din', 'Dinv36724' => 'din', 'Dinv37320' => 'din', 'Dinv39192' => 'din', 'Dinv41273' => 'din', 'Dinv42279' => 'din', 'Dinv42748' => 'din', 'Dinv43354' => 'din', 'Dinv44920' => 'din', 'Duzib041G0688' => 'dzi', 'Duzib093G0508' => 'dzi', 'Duzib093G1731' => 'dzi', 'Duzib106G0958' => 'dzi', 'Duzib116G0003' => 'dzi', 'Duzib128G0863' => 'dzi', 'Duzib147G0320' => 'dzi', 'Duzib150G0235' => 'dzi', 'Duzib150G1098' => 'dzi', 'Duzib150G1322' => 'dzi', 'Duzib150G1603' => 'dzi', 'Duzib168G0838' => 'dzi', 'Duzib168G1549' => 'dzi', 'Duzib168G1719' => 'dzi', 'Duzib168G2274' => 'dzi', 'Duzib170G0468' => 'dzi', 'Duzib170G1049' => 'dzi', 'Duzib187G0088' => 'dzi', 'Duzib187G0572' => 'dzi', 'Duzib264G1046' => 'dzi', 'ECA232G4659' => 'eca', 'ECA233G0009' => 'eca', 'ECA236G4804' => 'eca', 'ECA238G0238' => 'eca', 'ECA238G1813' => 'eca', 'ECA240G2131' => 'eca', 'ECA240G3632' => 'eca', 'ECA246G0695' => 'eca', 'ECA248G1907' => 'eca', 'ECA248G2847' => 'eca', 'EL10Ac1g02338' => 'bvu', 'EL10Ac2g03953' => 'bvu', 'EL10Ac6g15577' => 'bvu', 'EL10Ac7g16641' => 'bvu', 'EL10Ac8g18270' => 'bvu', 'EL10Ac8g18337' => 'bvu', 'Eucgr.A01670' => 'egr', 'Eucgr.B03941' => 'egr', 'Eucgr.C00190' => 'egr', 'Eucgr.C00624' => 'egr', 'Eucgr.C00947' => 'egr', 'Eucgr.C02280' => 'egr', 'Eucgr.C02391' => 'egr', 'Eucgr.C03699' => 'egr', 'Eucgr.F02207' => 'egr', 'Eucgr.I00663' => 'egr', 'Eucgr.J00892' => 'egr', 'Eucgr.L03599' => 'egr', 'FAN02G1465' => 'fan', 'FAN05G0647' => 'fan', 'FAN05G3607' => 'fan', 'FAN07G0351' => 'fan', 'FAN09G4417' => 'fan', 'FAN11G3416' => 'fan', 'FAN12G0777' => 'fan', 'FAN14G4511' => 'fan', 'FAN15G1594' => 'fan', 'FAN16G2908' => 'fan', 'FAN17G3004' => 'fan', 'FAN19G0563' => 'fan', 'FAN19G0879' => 'fan', 'FAN20G2033' => 'fan', 'FAN21G0785' => 'fan', 'FAN22G2338' => 'fan', 'FAN23G2610' => 'fan', 'FAN24G0336' => 'fan', 'FAN25G1063' => 'fan', 'FAN26G1291' => 'fan', 'FAN26G3032' => 'fan', 'FAN26G3141' => 'fan', 'FAN27G0689' => 'fan', 'FAN28G1997' => 'fan', 'FvH4_1g18500' => 'fve', 'FvH4_2g32340' => 'fve', 'FvH4_2g32440' => 'fve', 'FvH4_3g30950' => 'fve', 'FvH4_4g09030' => 'fve', 'FvH4_6g16480' => 'fve', 'Glyma.01G004900' => 'gma', 'Glyma.01G196200' => 'gma', 'Glyma.03G183900' => 'gma', 'Glyma.04G048900' => 'gma', 'Glyma.05G109200' => 'gma', 'Glyma.05G224300' => 'gma', 'Glyma.06G050000' => 'gma', 'Glyma.07G126900' => 'gma', 'Glyma.10G054700' => 'gma', 'Glyma.11G045400' => 'gma', 'Glyma.11G194100' => 'gma', 'Glyma.12G079800' => 'gma', 'Glyma.12G177700' => 'gma', 'Glyma.13G094400' => 'gma', 'Glyma.13G141900' => 'gma', 'Glyma.13G322900' => 'gma', 'Glyma.14G090900' => 'gma', 'Glyma.14G091500' => 'gma', 'Glyma.17G065800' => 'gma', 'Glyma.17G158000' => 'gma', 'Glyma.17G231900' => 'gma', 'Glyma.17G232220' => 'gma', 'Glyma.19G184500' => 'gma', 'Gohir.A01G213300' => 'ghi', 'Gohir.A05G005900' => 'ghi', 'Gohir.A05G106700' => 'ghi', 'Gohir.A05G212850' => 'ghi', 'Gohir.A06G027000' => 'ghi', 'Gohir.A06G069700' => 'ghi', 'Gohir.A07G009450' => 'ghi', 'Gohir.A07G022168' => 'ghi', 'Gohir.A08G200200' => 'ghi', 'Gohir.A09G146000' => 'ghi', 'Gohir.A11G211300' => 'ghi', 'Gohir.A12G080900' => 'ghi', 'Gohir.A13G211800' => 'ghi', 'Gohir.A13G232700' => 'ghi', 'Gohir.D01G202000' => 'ghi', 'Gohir.D05G006600' => 'ghi', 'Gohir.D05G106800' => 'ghi', 'Gohir.D05G216200' => 'ghi', 'Gohir.D06G024300' => 'ghi', 'Gohir.D06G068400' => 'ghi', 'Gohir.D07G009750' => 'ghi', 'Gohir.D07G023500' => 'ghi', 'Gohir.D08G217400' => 'ghi', 'Gohir.D09G141800' => 'ghi', 'Gohir.D11G211800' => 'ghi', 'Gohir.D12G077700' => 'ghi', 'Gohir.D13G215900' => 'ghi', 'Gohir.D13G238400' => 'ghi', 'Gorai.001G010000' => 'gra', 'Gorai.001G024300' => 'gra', 'Gorai.002G246700' => 'gra', 'Gorai.004G231100' => 'gra', 'Gorai.006G162800' => 'gra', 'Gorai.007G227500' => 'gra', 'Gorai.008G086400' => 'gra', 'Gorai.009G006700' => 'gra', 'Gorai.009G110800' => 'gra', 'Gorai.009G222900' => 'gra', 'Gorai.010G028800' => 'gra', 'Gorai.010G079900' => 'gra', 'Gorai.013G246200' => 'gra', 'Gorai.013G269300' => 'gra', 'GSVIVG01004464001' => 'vvi', 'GSVIVG01009280001' => 'vvi', 'GSVIVG01015264001' => 'vvi', 'GSVIVG01029145001' => 'vvi', 'GSVIVG01031496001' => 'vvi', 'GSVIVG01033648001' => 'vvi', 'GSVIVG01035332001' => 'vvi', 'HanXRQChr01g0019521' => 'han', 'HanXRQChr02g0034781' => 'han', 'HanXRQChr02g0048391' => 'han', 'HanXRQChr03g0069011' => 'han', 'HanXRQChr05g0133361' => 'han', 'HanXRQChr05g0137131' => 'han', 'HanXRQChr09g0238551' => 'han', 'HanXRQChr09g0245091' => 'han', 'HanXRQChr09g0245101' => 'han', 'HanXRQChr09g0253771' => 'han', 'HanXRQChr09g0255551' => 'han', 'HanXRQChr09g0259351' => 'han', 'HanXRQChr10g0313311' => 'han', 'HanXRQChr12g0376661' => 'han', 'HanXRQChr14g0452571' => 'han', 'HanXRQChr14g0454461' => 'han', 'HanXRQChr15g0475491' => 'han', 'Haze_03972' => 'cav', 'Haze_18230' => 'cav', 'Haze_20528' => 'cav', 'Haze_22125' => 'cav', 'Haze_22365' => 'cav', 'Haze_23731' => 'cav', 'Haze_25858' => 'cav', 'Hma1.2p1_0049F.1_g028150' => 'hma', 'Hma1.2p1_0205F.1_g086910' => 'hma', 'Hma1.2p1_0424F.1_g150390' => 'hma', 'Hma1.2p1_0477F.1_g161050' => 'hma', 'Hma1.2p1_0663F.1_g198570' => 'hma', 'Hma1.2p1_1493F.1_g286833' => 'hma', 'Hma1.2p1_2290F.1_g319030' => 'hma', 'Hma1.2p1_2651F.1_g326170' => 'hma', 'Hma1.2p1_2719F.1_g327455' => 'hma', 'Hma1.2p1_2725F.1_g327550' => 'hma', 'HPP92_002822' => 'vpl', 'HPP92_002880' => 'vpl', 'HPP92_002891' => 'vpl', 'HPP92_007683' => 'vpl', 'HPP92_014814' => 'vpl', 'HPP92_015845' => 'vpl', 'HPP92_017151' => 'vpl', 'HPP92_017693' => 'vpl', 'HPP92_022582' => 'vpl', 'HPP92_026017' => 'vpl', 'HPP92_026509' => 'vpl', 'HPP92_026745' => 'vpl', 'Hund03370' => 'sun', 'Hund05262' => 'sun', 'Hund09012' => 'sun', 'Hund09062' => 'sun', 'Hund16427' => 'sun', 'Hund20338' => 'sun', 'Hund26309' => 'sun', 'Hund28963' => 'sun', 'Hund28965' => 'sun', 'Lalb_Chr01g0018671' => 'lal', 'Lalb_Chr03g0027641' => 'lal', 'Lalb_Chr05g0223481' => 'lal', 'Lalb_Chr07g0180271' => 'lal', 'Lalb_Chr09g0323771' => 'lal', 'Lalb_Chr12g0199231' => 'lal', 'Lalb_Chr13g0300361' => 'lal', 'Lalb_Chr14g0367941' => 'lal', 'Lalb_Chr14g0374481' => 'lal', 'Lalb_Chr16g0379011' => 'lal', 'Lalb_Chr19g0137001' => 'lal', 'Lalb_Chr22g0355871' => 'lal', 'Lalb_Chr22g0355911' => 'lal', 'Lalb_Chr22g0355921' => 'lal', 'Lalb_Chr23g0267681' => 'lal', 'Lalb_Chr24g0394851' => 'lal', 'Lj1A210G39' => 'lonja', 'Lj1g0001804' => 'lja', 'Lj1g0025544' => 'lja', 'Lj1g0025715' => 'lja', 'Lj2A1013T25' => 'lonja', 'Lj2A424T67' => 'lonja', 'Lj2g0010024' => 'lja', 'Lj2g0027846' => 'lja', 'Lj3g0019570' => 'lja', 'Lj3g0027777' => 'lja', 'Lj3P986T73' => 'lonja', 'Lj4A167T28' => 'lonja', 'Lj4A750T30' => 'lonja', 'Lj4A77T55' => 'lonja', 'Lj4g0008326' => 'lja', 'Lj4g0018203' => 'lja', 'Lj5g0004608' => 'lja', 'Lj5g0013148' => 'lja', 'Lj5g0019032' => 'lja', 'Lj7A695T40' => 'lonja', 'Lj9C688G7' => 'lonja', 'Lsat_1_v5_gn_1_17440' => 'lsa', 'Lsat_1_v5_gn_1_51660' => 'lsa', 'Lsat_1_v5_gn_1_62660' => 'lsa', 'Lsat_1_v5_gn_2_107241' => 'lsa', 'Lsat_1_v5_gn_2_99420' => 'lsa', 'Lsat_1_v5_gn_3_85080' => 'lsa', 'Lsat_1_v5_gn_6_43981' => 'lsa', 'Lsat_1_v5_gn_7_38881' => 'lsa', 'Lsat_1_v5_gn_7_55061' => 'lsa', 'Lsat_1_v5_gn_8_67501' => 'lsa', 'Lsat_1_v5_gn_9_79301' => 'lsa', 'Manes.04G014800' => 'mes', 'Manes.06G024800' => 'mes', 'Manes.08G011300' => 'mes', 'Manes.09G065400' => 'mes', 'Manes.11G151100' => 'mes', 'Manes.12G118600' => 'mes', 'Manes.13G107900' => 'mes', 'Manes.16G076800' => 'mes', 'Manes.16G106000' => 'mes', 'Manes.18G051300' => 'mes', 'Mapoly0034s0034' => 'mpo', 'Mapoly0874s0001' => 'mpo', 'MBI01_g10309_MAGBIO' => 'mbi', 'MBI01_g35892_MAGBIO' => 'mbi', 'MBI04_g06984_MAGBIO' => 'mbi', 'MBI06_g25999_MAGBIO' => 'mbi', 'MBI06_g26000_MAGBIO' => 'mbi', 'MBI06_g37249_MAGBIO' => 'mbi', 'MBI14_g22127_MAGBIO' => 'mbi', 'MBI16_g09810_MAGBIO' => 'mbi', 'MBI16_g11015_MAGBIO' => 'mbi', 'MBI16_g32009_MAGBIO' => 'mbi', 'MBI18_g08872_MAGBIO' => 'mbi', 'MBI18_g09614_MAGBIO' => 'mbi', 'MD00G1032600' => 'mdo', 'MD02G1191000' => 'mdo', 'MD04G1092400' => 'mdo', 'MD08G1074700' => 'mdo', 'MD08G1076200' => 'mdo', 'MD11G1146200' => 'mdo', 'MD12G1110500' => 'mdo', 'MD13G1266500' => 'mdo', 'MD15G1062400' => 'mdo', 'MD15G1063300' => 'mdo', 'MD15G1201500' => 'mdo', 'MD15G1302300' => 'mdo', 'MD16G1266600' => 'mdo', 'Medtr1g017000' => 'mtr', 'Medtr1g017140' => 'mtr', 'Medtr2g095520' => 'mtr', 'Medtr3g103570' => 'mtr', 'Medtr4g057635' => 'mtr', 'Medtr4g097570' => 'mtr', 'Medtr4g128670' => 'mtr', 'Medtr5g014990' => 'mtr', 'Medtr6g090405' => 'mtr', 'Medtr7g102110' => 'mtr', 'MELO3C004080.2' => 'cme', 'MELO3C004947.2' => 'cme', 'MELO3C007663.2' => 'cme', 'MELO3C009364.2' => 'cme', 'MELO3C010773.2' => 'cme', 'MELO3C010777.2' => 'cme', 'MELO3C015435.2' => 'cme', 'MELO3C016847.2' => 'cme', 'MELO3C017491.2' => 'cme', 'MELO3C026906.2' => 'cme', 'MELO3C032944.2' => 'cme', 'Migut.A00164' => 'egut', 'Migut.C00438' => 'egut', 'Migut.J01464' => 'egut', 'Migut.K00256' => 'egut', 'Migut.K00566' => 'egut', 'Migut.L00434' => 'egut', 'Migut.L01708' => 'egut', 'Migut.N02569' => 'egut', 'MSTRG.10733' => 'ama', 'MSTRG.17768' => 'ama', 'MSTRG.18682' => 'ama', 'MSTRG.18690' => 'ama', 'MSTRG.19183' => 'ama', 'MSTRG.21094' => 'ama', 'MSTRG.25013' => 'ama', 'MSTRG.25932' => 'ama', 'MSTRG.26232' => 'ama', 'MSTRG.26691' => 'ama', 'MSTRG.3485' => 'ama', 'MSTRG.5766' => 'ama', 'Nitab4.5_0000063g0150' => 'nta', 'Nitab4.5_0000244g0260' => 'nta', 'Nitab4.5_0000578g0120' => 'nta', 'Nitab4.5_0001050g0010' => 'nta', 'Nitab4.5_0001074g0040' => 'nta', 'Nitab4.5_0001163g0150' => 'nta', 'Nitab4.5_0001442g0010' => 'nta', 'Nitab4.5_0001646g0070' => 'nta', 'Nitab4.5_0003478g0050' => 'nta', 'Nitab4.5_0003781g0060' => 'nta', 'Nitab4.5_0004621g0030' => 'nta', 'Nitab4.5_0004958g0020' => 'nta', 'Nitab4.5_0004993g0020' => 'nta', 'Nitab4.5_0005116g0040' => 'nta', 'Nitab4.5_0006804g0010' => 'nta', 'Nitab4.5_0007679g0010' => 'nta', 'Nitab4.5_0012173g0010' => 'nta', 'Nn2g12651' => 'nnu', 'Nn2g13807' => 'nnu', 'Nn5g30682' => 'nnu', 'Nn6g34550' => 'nnu', 'Nn6g35279' => 'nnu', 'Nn6g35372' => 'nnu', 'Nn8g38987' => 'nnu', 'Oeu002540.1' => 'oeu', 'Oeu002541.1' => 'oeu', 'Oeu005024.3' => 'oeu', 'Oeu009847.1' => 'oeu', 'Oeu011790.1' => 'oeu', 'Oeu013349.1' => 'oeu', 'Oeu013538.1' => 'oeu', 'Oeu014014.1' => 'oeu', 'Oeu018479.1' => 'oeu', 'Oeu019496.1' => 'oeu', 'Oeu031627.1' => 'oeu', 'Oeu041488.1' => 'oeu', 'Oeu053661.1' => 'oeu', 'Oeu053685.1' => 'oeu', 'Oeu057343.1' => 'oeu', 'Oeu063190.1' => 'oeu', 'Os01g0191900' => 'osa', 'Os01g0685400' => 'osa', 'Os01g0722300' => 'osa', 'Os02g0786400' => 'osa', 'Os03g0771100' => 'osa', 'Os05g0553400' => 'osa', 'Os08g0248700' => 'osa', 'Os09g0431300' => 'osa', 'Peaxi162Scf00050g00512' => 'pax', 'Peaxi162Scf00096g01718' => 'pax', 'Peaxi162Scf00114g00127' => 'pax', 'Peaxi162Scf00160g00722' => 'pax', 'Peaxi162Scf00311g01112' => 'pax', 'Peaxi162Scf00682g00009' => 'pax', 'Peaxi162Scf00840g00121' => 'pax', 'Peaxi162Scf00847g00211' => 'pax', 'Peaxi162Scf00944g00140' => 'pax', 'Peaxi162Scf01314g00012' => 'pax', 'PGR004G0475' => 'pgr', 'PGR004G0919' => 'pgr', 'PGR031G0087' => 'pgr', 'PGR044G1027' => 'pgr', 'PGR102G0021' => 'pgr', 'PGR102G0509' => 'pgr', 'PGR102G1226' => 'pgr', 'PGR102G3089' => 'pgr', 'PGR119G1335' => 'pgr', 'PGR142G2277' => 'pgr', 'PGR142G4083' => 'pgr', 'PGSC0003DMG400000349' => 'stu', 'PGSC0003DMG400002013' => 'stu', 'PGSC0003DMG400003890' => 'stu', 'PGSC0003DMG400004948' => 'stu', 'PGSC0003DMG400008123' => 'stu', 'PGSC0003DMG400013994' => 'stu', 'PGSC0003DMG400018750' => 'stu', 'PGSC0003DMG400021401' => 'stu', 'Phvul.001G032100' => 'pvu', 'Phvul.001G032600' => 'pvu', 'Phvul.001G179400' => 'pvu', 'Phvul.002G008800' => 'pvu', 'Phvul.002G306000' => 'pvu', 'Phvul.003G148200' => 'pvu', 'Phvul.003G232300' => 'pvu', 'Phvul.004G173500' => 'pvu', 'Phvul.005G131300' => 'pvu', 'Phvul.007G147600' => 'pvu', 'Phvul.009G075000' => 'pvu', 'Phvul.011G084500' => 'pvu', 'Potri.002G113700' => 'ptr', 'Potri.004G215100' => 'ptr', 'Potri.006G123400' => 'ptr', 'Potri.006G170800' => 'ptr', 'Potri.006G171184' => 'ptr', 'Potri.006G234200' => 'ptr', 'Potri.007G007900' => 'ptr', 'Potri.009G007100' => 'ptr', 'Potri.016G099200' => 'ptr', 'Potri.018G058800' => 'ptr', 'Potri.018G095900' => 'ptr', 'Prupe.1G089700' => 'ppe', 'Prupe.1G416400' => 'ppe', 'Prupe.1G417400' => 'ppe', 'Prupe.6G109200' => 'ppe', 'Prupe.6G214300' => 'ppe', 'Prupe.7G128800' => 'ppe', 'Prupe.7G216000' => 'ppe', 'Psat0s127g0040' => 'psa', 'Psat0ss4454g0040' => 'psa', 'Psat1g048800' => 'psa', 'Psat2g172560' => 'psa', 'Psat3g042200' => 'psa', 'Psat4g012160' => 'psa', 'Psat4g080720' => 'psa', 'Psat5g280960' => 'psa', 'Psat7g146760' => 'psa', 'PSO017G5712' => 'pso', 'PSO063G0505' => 'pso', 'PSO063G7494' => 'pso', 'PSO170G3374' => 'pso', 'PSO210G0287' => 'pso', 'PSO210G1392' => 'pso', 'PSO210G6495' => 'pso', 'PSO223G0014' => 'pso', 'PSO339G1653' => 'pso', 'PSO339G5478' => 'pso', 'PSO541G2391' => 'pso', 'PSO675G7189' => 'pso', 'PSO801G0120' => 'pso', 'PSO832G2821' => 'pso', 'QL01p015656' => 'qlo', 'QL02p001827' => 'qlo', 'QL02p040297' => 'qlo', 'QL02p097031' => 'qlo', 'QL06p038531' => 'qlo', 'QL07p043124' => 'qlo', 'QL09p016222' => 'qlo', 'RcHm_v2.0_Chr2g0092411' => 'rch', 'RcHm_v2.0_Chr2g0109131' => 'rch', 'RcHm_v2.0_Chr3g0470381' => 'rch', 'RcHm_v2.0_Chr3g0473591' => 'rch', 'RcHm_v2.0_Chr4g0403351' => 'rch', 'RcHm_v2.0_Chr5g0057501' => 'rch', 'RcHm_v2.0_Chr6g0310231' => 'rch', 'RcHm_v2.0_Chr6g0310351' => 'rch', 'Rhsim01G0007200' => 'rsi', 'Rhsim03G0090900' => 'rsi', 'Rhsim03G0263500' => 'rsi', 'Rhsim06G0065800' => 'rsi', 'Rhsim08G0089600' => 'rsi', 'Rhsim10G0094000' => 'rsi', 'Rhsim13G0099300' => 'rsi', 'Sabra02G0090100' => 'sbr', 'Sabra04G0146100' => 'sbr', 'Sabra06G0097600' => 'sbr', 'Sabra06G0131700' => 'sbr', 'Sabra06G0182400' => 'sbr', 'Sabra07G0006100' => 'sbr', 'Sabra09G0004100' => 'sbr', 'Sabra16G0099000' => 'sbr', 'Sabra18G0081800' => 'sbr', 'SalBow1G5310' => 'sbo', 'SalBow1G6188' => 'sbo', 'SalBow1G7808' => 'sbo', 'SalBow3G0111' => 'sbo', 'SalBow3G1132' => 'sbo', 'SalBow3G1477' => 'sbo', 'SalBow5G1061' => 'sbo', 'SalBow6G6456' => 'sbo', 'SalBow7G2510' => 'sbo', 'Sc03g0002920' => 'sci', 'Sc08g0005530' => 'sci', 'Sc08g0008190' => 'sci', 'Sc09g0009570' => 'sci', 'Sc15g0005310' => 'sci', 'Sc20g0005550' => 'sci', 'Sed0003469' => 'sed', 'Sed0003533' => 'sed', 'Sed0005366' => 'sed', 'Sed0009466' => 'sed', 'Sed0016069' => 'sed', 'Sed0016501' => 'sed', 'Sed0021852' => 'sed', 'Sed0022496' => 'sed', 'Sed0025266' => 'sed', 'Sed0025641' => 'sed', 'Sed0026129' => 'sed', 'SEGI_01923' => 'sgi', 'SEGI_13521' => 'sgi', 'SEGI_16684' => 'sgi', 'SEGI_20990' => 'sgi', 'SEGI_21592' => 'sgi', 'SEGI_27027' => 'sgi', 'SEGI_32207' => 'sgi', 'SEGI_35429' => 'sgi', 'SEGI_38550' => 'sgi', 'SEGI_38746' => 'sgi', 'SEGI_41251' => 'sgi', 'SGA_v2.0_scaffold127G34047' => 'sas', 'SGA_v2.0_scaffold224G42939' => 'sas', 'SGA_v2.0_scaffold269G46267' => 'sas', 'SGA_v2.0_scaffold564G52940' => 'sas', 'SGA_v2.0_scaffold66G22472' => 'sas', 'SGA_v2.0_scaffold69G23281' => 'sas', 'SGA_v2.0_scaffold88G27207' => 'sas', 'SHI18701' => 'shi', 'SMO145G0217' => 'smo', 'Solyc02g091980.2' => 'sly', 'Solyc04g077260.3' => 'sly', 'Solyc06g074910.3' => 'sly', 'Solyc06g074920.3' => 'sly', 'Solyc07g006750.3' => 'sly', 'Solyc09g008250.4' => 'sly', 'Solyc11g069030.3' => 'sly', 'Solyc12g008670.2' => 'sly', 'Sopen02g036550' => 'spe', 'Sopen04g030840' => 'spe', 'Sopen06g031320' => 'spe', 'Sopen07g002850' => 'spe', 'Sopen09g003070' => 'spe', 'Sopen11g027740' => 'spe', 'Sopen12g003610' => 'spe', 'Sp2g28880' => 'spa', 'Sp4g19180' => 'spa', 'Sp5g12400' => 'spa', 'Sp6g19310' => 'spa', 'Sp6g22390' => 'spa', 'Sp7g35430' => 'spa', 'TAR369G0189' => 'tar', 'TAR376G0161' => 'tar', 'TAR381G0651' => 'tar', 'TAR383G0077' => 'tar', 'TAR383G0254' => 'tar', 'TAR623G0833' => 'tar', 'TAR624G0731' => 'tar', 'TAR625G0457' => 'tar', 'TAR626G0124' => 'tar', 'TAR628G1027' => 'tar', 'TAR633G1784' => 'tar', 'TAR636G0891' => 'tar', 'THA.LOC104798361' => 'tha', 'THA.LOC104801909' => 'tha', 'THA.LOC104805242' => 'tha', 'THA.LOC104806973' => 'tha', 'THA.LOC104807062' => 'tha', 'THA.LOC104807855' => 'tha', 'THA.LOC104810874' => 'tha', 'THA.LOC104811806' => 'tha', 'THA.LOC104817805' => 'tha', 'THA.LOC104819276' => 'tha', 'THA.LOC104821217' => 'tha', 'THA.LOC104825801' => 'tha', 'Thecc.01G078100' => 'tca', 'Thecc.05G068200' => 'tca', 'Thecc.08G082600' => 'tca', 'Thecc.09G049800' => 'tca', 'Thecc.09G095800' => 'tca', 'Thecc.09G168200' => 'tca', 'Thecc.09G349100' => 'tca', 'Thhalv10005299m.g' => 'esa', 'Thhalv10010576m.g' => 'esa', 'Thhalv10014063m.g' => 'esa', 'Thhalv10015689m.g' => 'esa', 'Thhalv10017791m.g' => 'esa', 'TPR.G11524' => 'tpr', 'TPR.G13006' => 'tpr', 'TPR.G13130' => 'tpr', 'TPR.G15214' => 'tpr', 'TPR.G15215' => 'tpr', 'TPR.G22828' => 'tpr', 'TPR.G26923' => 'tpr', 'TPR.G27855' => 'tpr', 'TPR.G30195' => 'tpr', 'TPR.G32812' => 'tpr', 'TPR.G3723' => 'tpr', 'TPR.G6159' => 'tpr', 'TWI12G0388' => 'twi', 'TWI31G1491' => 'twi', 'TWI32G0445' => 'twi', 'TWI32G0548' => 'twi', 'TWI34G0447' => 'twi', 'TWI34G0716' => 'twi', 'TWI53G0414' => 'twi', 'TWI56G0346' => 'twi', 'TWI74G0666' => 'twi', 'TWI75G1596' => 'twi', 'TWI77G0053' => 'twi', 'TWI77G0903' => 'twi', 'TWI79G0732' => 'twi', 'unitig_0.g569' => 'ugi', 'unitig_0.g682' => 'ugi', 'unitig_21.g20647' => 'ugi', 'unitig_27.g25051' => 'ugi', 'unitig_744.g24071' => 'ugi', 'unitig_746.g26765' => 'ugi', 'unitig_747.g21976' => 'ugi', 'unitig_899.g15219' => 'ugi', 'vmacro03267' => 'vma', 'vmacro05375' => 'vma', 'vmacro06023' => 'vma', 'vmacro07298' => 'vma', 'vmacro07299' => 'vma', 'vmacro10829' => 'vma', 'vmacro13105' => 'vma', 'vmacro14400' => 'vma', 'vmacro14401' => 'vma', 'vmacro14402' => 'vma', 'vmacro18004' => 'vma', 'vmacro21403' => 'vma', 'VMungo0647G1255' => 'vmu', 'VMungo0647G1994' => 'vmu', 'VMungo0720G2554' => 'vmu', 'VMungo1080G0373' => 'vmu', 'VMungo1127G1238' => 'vmu', 'VMungo1215G0135' => 'vmu', 'VMungo1215G2303' => 'vmu', 'VMungo1383G2763' => 'vmu', 'Zm00001eb058880' => 'zma', 'Zm00001eb086570' => 'zma', 'Zm00001eb095760' => 'zma', 'Zm00001eb099830' => 'zma', 'Zm00001eb121290' => 'zma', 'Zm00001eb154560' => 'zma', 'Zm00001eb156520' => 'zma', 'Zm00001eb178050' => 'zma', 'Zm00001eb192770' => 'zma', 'Zm00001eb213800' => 'zma', 'Zm00001eb257280' => 'zma', 'Zm00001eb295060' => 'zma', 'Zm00001eb313580' => 'zma', 'Zm00001eb343060' => 'zma', 'Zm00001eb360510' => 'zma', 'Zm00001eb361680' => 'zma' ) $gf_id = 'HOM05D000569' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000569' ) $data_identifier = 'HOM05D000569' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'ach' => (int) 14, 'amhyb' => (int) 2, 'aly' => (int) 6, 'aox' => (int) 5, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 24, 'bol' => (int) 13, 'bra' => (int) 13, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 14, 'cla' => (int) 10, 'col' => (int) 4, 'cpa' => (int) 5, 'csa' => (int) 11, 'camsi' => (int) 18, 'dca' => (int) 11, 'din' => (int) 16, 'dzi' => (int) 20, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 12, 'fan' => (int) 24, 'fve' => (int) 6, 'gma' => (int) 23, 'ghi' => (int) 28, 'gra' => (int) 14, 'vvi' => (int) 7, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 10, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 16, 'lonja' => (int) 9, 'lja' => (int) 12, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 12, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 11, 'egut' => (int) 8, 'ama' => (int) 12, 'nta' => (int) 17, 'nnu' => (int) 7, 'oeu' => (int) 16, 'osa' => (int) 8, 'pax' => (int) 10, 'pgr' => (int) 11, 'stu' => (int) 8, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppe' => (int) 7, 'psa' => (int) 9, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 9, 'sci' => (int) 6, 'sed' => (int) 11, 'sgi' => (int) 11, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 6, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 5, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 8, 'vma' => (int) 12, 'vmu' => (int) 8, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb361680' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1